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Entity

Name
Neuronal Outgrowth
Namespace
mesh
Namespace Version
20180828
Namespace URL
https://raw.githubusercontent.com/pharmacome/terminology/1b20f0637c395f8aa89c2e2e342d7b704062c242/external/mesh-names.belns

Appears in Networks 8

In-Edges 17

p(HGNC:APP) increases bp(MESH:"Neuronal Outgrowth") View Subject | View Object

The N-terminal heparin-binding domain of APP (res- idues 28–123) upstream from the RERMS sequence also stim- ulates neurite outgrowth and promotes synaptogenesis. PubMed:18650430

p(HGNC:APP) association bp(MESH:"Neuronal Outgrowth") View Subject | View Object

A role for APP has been suggested in neurite outgrowth and synaptogenesis, neuronal protein trafficking along the axon, transmembrane signal transduction, cell adhesion, calcium metabolism, etc, all requiring additional in vivo evidence (reviewed in [19]) PubMed:21214928

Annotations
Confidence
High

a(HBP:HBP00067) increases bp(MESH:"Neuronal Outgrowth") View Subject | View Object

sAPP-alpha is thought to promote neurite outgrowth and synaptogenesis as well as cell adhesion (Mattson 1997; Gakhar Koppole et al. 2008) PubMed:22122372

a(CHEBI:"amyloid-beta") decreases bp(MESH:"Neuronal Outgrowth") View Subject | View Object

For example, a recent study has shown that alpha7-specific ligands rescue the Abeta-induced decrease in neurite outgrowth of cultured mouse neurons (Hu et al., 2007). PubMed:19293145

p(MGI:Chrna7) increases bp(MESH:"Neuronal Outgrowth") View Subject | View Object

For example, a recent study has shown that alpha7-specific ligands rescue the Abeta-induced decrease in neurite outgrowth of cultured mouse neurons (Hu et al., 2007). PubMed:19293145

complex(p(HGNC:PPP2CA), p(HGNC:PPP2R1A), p(INTERPRO:"Protein phosphatase 2A regulatory subunit PR55")) regulates bp(MESH:"Neuronal Outgrowth") View Subject | View Object

Deregulation of PP2A/Bα alone also affects microtubule stability (Nunbhakdi-Craig et al., 2007) and neurite outgrowth (Sontag et al.,2010) in neuroblastoma cells PubMed:24653673

complex(p(HGNC:PPP2CB), p(HGNC:PPP2R1A), p(INTERPRO:"Protein phosphatase 2A regulatory subunit PR55")) regulates bp(MESH:"Neuronal Outgrowth") View Subject | View Object

Deregulation of PP2A/Bα alone also affects microtubule stability (Nunbhakdi-Craig et al., 2007) and neurite outgrowth (Sontag et al.,2010) in neuroblastoma cells PubMed:24653673

p(FPLX:PPP2, pmod(Me)) regulates bp(MESH:"Neuronal Outgrowth") View Subject | View Object

In cultured cells, deregulation of PP2A methylation also affects APP processing (Sontag et al.,2007), neurite outgrowth (Sontag et al.,2010) and tau distribution (Sontag et al.,2013). PubMed:24653673

act(complex(GO:"NF-kappaB complex")) increases bp(MESH:"Neuronal Outgrowth") View Subject | View Object

NF-κB is also indispensable in the neuronal differentiation of neuroblastoma cells [186] as its transcriptional activity directly orchestrates dendritic spine formation and neurite outgrowth PubMed:28745240

act(complex(GO:"NF-kappaB complex")) increases bp(MESH:"Neuronal Outgrowth") View Subject | View Object

Both, brain-derived neurotrophic factor (BDNF) and ciliary neurotrophic factor (CNTF) promote neurite outgrowth, in a NF- κB - dependent manner, in primary cultures of nodose ganglion sensory neurons from developing mice PubMed:28745240

act(complex(GO:"NF-kappaB complex")) increases bp(MESH:"Neuronal Outgrowth") View Subject | View Object

This paradoxical incongruity in the effects of NF-κB emanate from the prevailing phosphorylation status of the p65 subunit (Ser536) and coinciding physiological and biochemical stimuli, with the phosphorylation status of p65 being inversely related to the NF-κB – induced neurite outgrowth PubMed:28745240

p(HGNC:BDNF) increases bp(MESH:"Neuronal Outgrowth") View Subject | View Object

Both, brain-derived neurotrophic factor (BDNF) and ciliary neurotrophic factor (CNTF) promote neurite outgrowth, in a NF- κB - dependent manner, in primary cultures of nodose ganglion sensory neurons from developing mice PubMed:28745240

p(HGNC:CNTF) increases bp(MESH:"Neuronal Outgrowth") View Subject | View Object

Both, brain-derived neurotrophic factor (BDNF) and ciliary neurotrophic factor (CNTF) promote neurite outgrowth, in a NF- κB - dependent manner, in primary cultures of nodose ganglion sensory neurons from developing mice PubMed:28745240

p(HGNC:RELA, pmod(Ph, Ser, 536)) negativeCorrelation bp(MESH:"Neuronal Outgrowth") View Subject | View Object

This paradoxical incongruity in the effects of NF-κB emanate from the prevailing phosphorylation status of the p65 subunit (Ser536) and coinciding physiological and biochemical stimuli, with the phosphorylation status of p65 being inversely related to the NF-κB – induced neurite outgrowth PubMed:28745240

p(FPLX:NFkappaB) association bp(MESH:"Neuronal Outgrowth") View Subject | View Object

In the nervous system, NF-κB has been proposed to serve important function by acting as a transcription regulator: it has roles in inflammation, neuronal survival, differentiation, apoptosis, neurite outgrowth, and synaptic plasticity [5], which are impaired in the progression of various neurodegenerative diseases especially in AD. PubMed:27288790

g(HGNC:"IQCJ-SCHIP1") increases bp(MESH:"Neuronal Outgrowth") View Subject | View Object

In the 3-month-old hippocampi (Figure 4B), we found significant sex-dependent changes for Adnp+/– gene regulation and NAP rescue in the following genes in male mice: (a) apolipoprotein E (Apoe), the lead gene for Alzheimer’s disease risk, which was shown before to be a major gene regulated by ADNP (10, 13); (b) Gm21949, which is suggested to play a role in calcium-mediated responses, action potential conduction in myelinated cells, and axonal outgrowth and guidance (6); (c) lipase A (Lipa), which is related to lipid metabolism and was previously shown to be regulated by the Adnp genotype in mice (3); (d) autism-associated neuroligin 2 (Nlgn2), a postsynaptic membrane cell adhesion protein that mediates the formation and maintenance of synapses between neurons (12); (e) paired box protein 6 (Pax6), a key regulator in glutamatergic neuronal differentiation (38) and cortical development (39), which was shown before by us to be regulated by ADNP (complete knockout of Adnp rendered Pax6 expression undetectable in the brain primordium, contrasting with increased expression in Adnp+/– embryos [ref. 1] and in subcortical brain domains of 2-month-old male Adnp+/– mice [ref. 3]); and (f) Wolframin endoplasmic reticulum transmembrane glycoprotein (Wfs1), which is associated with neurodegeneration and cellular calcium homeostasis regulation and was previously shown to be regulated by NAP (34). PubMed:30106381

Out-Edges 3

bp(MESH:"Neuronal Outgrowth") association p(HGNC:APP) View Subject | View Object

A role for APP has been suggested in neurite outgrowth and synaptogenesis, neuronal protein trafficking along the axon, transmembrane signal transduction, cell adhesion, calcium metabolism, etc, all requiring additional in vivo evidence (reviewed in [19]) PubMed:21214928

Annotations
Confidence
High

bp(MESH:"Neuronal Outgrowth") negativeCorrelation p(HGNC:RELA, pmod(Ph, Ser, 536)) View Subject | View Object

This paradoxical incongruity in the effects of NF-κB emanate from the prevailing phosphorylation status of the p65 subunit (Ser536) and coinciding physiological and biochemical stimuli, with the phosphorylation status of p65 being inversely related to the NF-κB – induced neurite outgrowth PubMed:28745240

bp(MESH:"Neuronal Outgrowth") association p(FPLX:NFkappaB) View Subject | View Object

In the nervous system, NF-κB has been proposed to serve important function by acting as a transcription regulator: it has roles in inflammation, neuronal survival, differentiation, apoptosis, neurite outgrowth, and synaptic plasticity [5], which are impaired in the progression of various neurodegenerative diseases especially in AD. PubMed:27288790

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If you find BEL Commons useful in your work, please consider citing: Hoyt, C. T., Domingo-Fernández, D., & Hofmann-Apitius, M. (2018). BEL Commons: an environment for exploration and analysis of networks encoded in Biological Expression Language. Database, 2018(3), 1–11.