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charles.hoyt@scai.fraunhofer.de at 2019-02-27 16:21:29.214117
Authors
Kristian Kolpeja
Contact
charles.hoyt@scai.fraunhofer.de
License
CC BY 4.0
Copyright
Copyright © 2018 Fraunhofer Institute SCAI, All rights reserved
Number Nodes
5
Number Edges
9
Number Components
1
Network Density
0.45
Average Degree
1.8
Number Citations
1
Number BEL Errors
0

Content Statistics

Network Overlap

The node-based overlap between this network and other networks is calculated as the Szymkiewicz-Simpson coefficient of their respective nodes. Up to the top 10 are shown below.

Network Overlap
Inflammasome Involvement in Alzheimer’s Disease v1.0.0 20%
Tau protein aggregation is associated with cellular senescence in the brain v1.0.0 20%
Clearance of Amyloid Beta and Tau in Alzheimer’s Disease:from Mechanisms to Therapy v1.0.1 20%
TAU and Interaction Partners v1.2.5 20%
Tau Modifications v1.9.5 20%
Activation and regulation of the inflammasomes v1.0.0 20%
The role of inflammasome in Alzheimer’s disease v1.0.3 20%
Anatabine ameliorates experimental autoimmune thyroiditis. v1.0.0 20%
Chronic Anatabine Treatment Reduces Alzheimer ’ s Disease (AD)-Like Pathology and Improves Socio-Behavioral Deficits in a Transgenic Mouse Model of AD v1.0.0 20%
Molecular Chaperone Functions in Protein Folding and Proteostasis v1.0.0 20%

Sample Edges

a(CHEBI:antalarmin) directlyDecreases act(p(RGD:Crh)) View Subject | View Object

Antalarmin potently displaced 1251-oCRH binding, exhibiting respectively Ki values of 1. 9 f 0.9,. 1.3 f .4, and 1.4 f .6 nM (mean f SEM) in pituitary, cerebellum, and frontal cortex homogenates.Antalarmin, by effectively displacing IoCRH binding in tissues predominately expressing CRHRl but not in tissues expressing CRHR2, appears to be a specific CRHRl receptor antagonist. PubMed:8940412

Annotations
Uberon
pituitary gland

a(CHEBI:antalarmin) directlyDecreases act(p(RGD:Crhr1)) View Subject | View Object

Antalarmin potently displaced 1251-oCRH binding, exhibiting respectively Ki values of 1. 9 f 0.9,. 1.3 f .4, and 1.4 f .6 nM (mean f SEM) in pituitary, cerebellum, and frontal cortex homogenates.Antalarmin, by effectively displacing IoCRH binding in tissues predominately expressing CRHRl but not in tissues expressing CRHR2, appears to be a specific CRHRl receptor antagonist. PubMed:8940412

Annotations
Uberon
pituitary gland

a(CHEBI:antalarmin) negativeCorrelation bp(GO:"inflammatory response") View Subject | View Object

These results raise the possibility that pyrrolopyrimidine compounds, such as antalarmin, which antagonize CRH at the level of its own receptor, have therapeutic potential in some forms of inflammation. PubMed:8940412

a(CHEBI:antalarmin) decreases sec(p(RGD:Pomc)) View Subject | View Object

Indeed, the compound significantly suppressed (XI-l-induced ACTH secretion to approximately the same extent as neutralizing polyclonal anti-CRH. PubMed:8940412

bp(GO:"inflammatory response") positiveCorrelation act(p(RGD:Crh)) View Subject | View Object

Corticotropin-releasing hormone (CRH) secreted from the hypothalamus is the major regulator of pituitary ACTH release and consequent glucocorticoid secretion. CRH secreted in the periphery also acts as a proinflammatory modulator. PubMed:8940412

Sample Nodes

a(CHEBI:antalarmin)

In-Edges: 1 | Out-Edges: 4 | Explore Neighborhood | Download JSON

p(RGD:Crh)

In-Edges: 2 | Out-Edges: 3 | Explore Neighborhood | Download JSON

p(RGD:Crhr1)

In-Edges: 2 | Out-Edges: 0 | Explore Neighborhood | Download JSON

p(RGD:Pomc)

In-Edges: 2 | Out-Edges: 0 | Explore Neighborhood | Download JSON

About

BEL Commons is developed and maintained in an academic capacity by Charles Tapley Hoyt and Daniel Domingo-Fernández at the Fraunhofer SCAI Department of Bioinformatics with support from the IMI project, AETIONOMY. It is built on top of PyBEL, an open source project. Please feel free to contact us here to give us feedback or report any issues. Also, see our Publishing Notes and Data Protection information.

If you find BEL Commons useful in your work, please consider citing: Hoyt, C. T., Domingo-Fernández, D., & Hofmann-Apitius, M. (2018). BEL Commons: an environment for exploration and analysis of networks encoded in Biological Expression Language. Database, 2018(3), 1–11.