Experiment 40

Created
2018-04-03 17:03:21
Type
CMPA
Permutations
250
Public
Omic Identifier
20
Omic Source File
GSE63063_GPL6947_MCI.tsv
Omic Description
Patients from GSE63063 with Alzheimer's disease (batch 1/GPL10558)
Query Identifier
32 ( Summarize | Explore )
Query Networks

Distribution

Results

avg stddev normality median neighbors subgraph_size
BiologicalProcess GOBP glial cell differentiation -1.7775104162384623 0.0 0.6002006622948999 -1.7775104162384623 6 9
BiologicalProcess GOBP reactive oxygen species metabolic process -0.39601247824615815 0.0 0.6002006622948999 -0.39601247824615815 2 10
BiologicalProcess GOBP pre-B cell receptor expression -0.2947364907499939 5.551115123125783e-17 1.170540055607074e-07 -0.294736490749994 1 2
BiologicalProcess GOBP lipid metabolic process -0.18630611028462954 5.551115123125783e-17 1.170540055607074e-07 -0.1863061102846296 2 4
BiologicalProcess GOBP central nervous system development -0.18630611028462954 5.551115123125783e-17 1.170540055607074e-07 -0.1863061102846296 2 4
BiologicalProcess MESHPP Oxidative Stress -0.13952497794047047 0.05061206045465954 0.9138295136732126 -0.090507399992327 6 21
BiologicalProcess GOBP response to oxidative stress -0.1274828131807979 0.0 0.6002006622948999 -0.1274828131807979 2 14
BiologicalProcess GOBP synaptic transmission, cholinergic -0.06411906339516901 1.3877787807814457e-17 1.1705400556070854e-07 -0.064119063395169 1 6
BiologicalProcess GOBP mitochondrial calcium ion transport -0.050637993748082095 6.938893903907228e-18 1.170540055607074e-07 -0.0506379937480821 1 10
BiologicalProcess GOBP glutamate secretion -0.050637993748082095 6.938893903907228e-18 1.170540055607074e-07 -0.0506379937480821 1 10
BiologicalProcess GOBP response to reactive oxygen species -0.050637993748082095 6.938893903907228e-18 1.170540055607074e-07 -0.0506379937480821 1 10
BiologicalProcess GOBP neuron projection development -0.03518050662596119 6.938893903907228e-18 1.170540055607074e-07 -0.0351805066259612 2 4
BiologicalProcess GOBP mitochondrion disassembly -0.0339559667461673 0.0 0.6002006622948999 -0.0339559667461673 1 7
BiologicalProcess GOBP lipid oxidation -0.0339559667461673 0.0 0.6002006622948999 -0.0339559667461673 1 7
BiologicalProcess GOBP positive regulation of cellular response to oxidative stress -0.0339559667461673 0.0 0.6002006622948999 -0.0339559667461673 1 7
BiologicalProcess GOBP Notch signaling pathway -0.0316778598259626 0.0 0.6002006622948999 -0.0316778598259626 2 6
BiologicalProcess GOBP apoptotic process -0.012265704535590895 1.734723475976807e-18 1.170540055607074e-07 -0.012265704535590897 5 9
BiologicalProcess GOBP learning 0.0104517114048015 0.0 0.6002006622948999 0.0104517114048015 1 2
BiologicalProcess GOBP cognition 0.0104517114048015 0.0 0.6002006622948999 0.0104517114048015 2 3
BiologicalProcess GOBP long-term synaptic potentiation 0.0339559667461673 0.0 0.6002006622948999 0.0339559667461673 1 7
BiologicalProcess GOBP memory 0.03665853708943521 6.938893903907228e-18 1.170540055607074e-07 0.0366585370894352 2 6
BiologicalProcess GOBP regulation of neuron migration 0.047540563436549596 0.0 0.6002006622948999 0.047540563436549596 3 6
BiologicalProcess GOBP neuron apoptotic process 0.0595978539576647 1.3877787807814457e-17 1.170540055607074e-07 0.05959785395766468 3 10
BiologicalProcess GOBP neuron death 0.06411906339516901 1.3877787807814457e-17 1.170540055607074e-07 0.064119063395169 2 7
BiologicalProcess GOBP cell death 0.07454254916921932 1.3877787807814457e-17 1.170540055607074e-07 0.0745425491692193 2 7
BiologicalProcess GOBP reactive oxygen species biosynthetic process 0.0857611101538378 0.0 0.6002006622948999 0.0857611101538378 1 2
BiologicalProcess GOBP reelin-mediated signaling pathway 0.09315305514231477 2.7755575615628914e-17 1.1705400556070854e-07 0.0931530551423148 1 3
BiologicalProcess GOBP mitochondria-nucleus signaling pathway 0.10127598749616419 1.3877787807814457e-17 1.1705400556070854e-07 0.1012759874961642 2 11
BiologicalProcess GOBP gliogenesis 0.28523006358844316 5.551115123125783e-17 1.170540055607074e-07 0.2852300635884431 1 6

About

BEL Commons is developed and maintained in an academic capacity by Charles Tapley Hoyt and Daniel Domingo-Fernández at the Fraunhofer SCAI Department of Bioinformatics with support from the IMI project, AETIONOMY. It is built on top of the open source project, PyBEL. Please feel free to contact us here to give us feedback or report any issues.